Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC9.91□□□□□ -0.82
Cux1P53564 Gm5306-201ENSMUST00000203325 757 ntBASIC9.91□□□□□ -0.82
Cux1P53564 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cux1P53564 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC9.91□□□□□ -0.82
Cux1P53564 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC9.91□□□□□ -0.82
Cux1P53564 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cux1P53564 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Cux1P53564 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cux1P53564 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC9.9□□□□□ -0.82
Cux1P53564 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Cux1P53564 Gm42462-201ENSMUST00000196543 1363 ntBASIC9.9□□□□□ -0.82
Cux1P53564 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cux1P53564 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Cux1P53564 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC9.9□□□□□ -0.82
Cux1P53564 Gm3715-201ENSMUST00000172308 617 ntBASIC9.9□□□□□ -0.82
Cux1P53564 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC9.9□□□□□ -0.82
Cux1P53564 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Gm28665-201ENSMUST00000189269 670 ntBASIC9.9□□□□□ -0.82
Cux1P53564 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.9□□□□□ -0.82
Cux1P53564 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC9.9□□□□□ -0.82
Cux1P53564 Gm2996-201ENSMUST00000211398 537 ntBASIC9.9□□□□□ -0.82
Cux1P53564 Gm6056-201ENSMUST00000221253 488 ntBASIC9.9□□□□□ -0.82
Cux1P53564 AC124709.3-201ENSMUST00000227294 171 ntBASIC9.9□□□□□ -0.82
Cux1P53564 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cux1P53564 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Cux1P53564 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cux1P53564 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cux1P53564 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cux1P53564 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.83
Cux1P53564 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cux1P53564 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.89□□□□□ -0.83
Cux1P53564 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cux1P53564 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cux1P53564 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 Gm11198-201ENSMUST00000119771 974 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Gm14900-201ENSMUST00000120304 733 ntBASIC9.89□□□□□ -0.83
Cux1P53564 n-R5s19-201ENSMUST00000122793 120 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Gm14457-201ENSMUST00000148069 1161 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Gm25445-201ENSMUST00000158996 299 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cux1P53564 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC9.89□□□□□ -0.83
Cux1P53564 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC9.89□□□□□ -0.83
Cux1P53564 AC153357.1-201ENSMUST00000219190 482 ntBASIC9.89□□□□□ -0.83
Cux1P53564 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 Gm38322-201ENSMUST00000194074 2300 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Gm20121-201ENSMUST00000198547 1594 ntBASIC9.89□□□□□ -0.83
Cux1P53564 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cux1P53564 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cux1P53564 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Cux1P53564 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cux1P53564 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Cux1P53564 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Cux1P53564 Gm11105-201ENSMUST00000112781 478 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gm21772-201ENSMUST00000169213 478 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gm17126-201ENSMUST00000172276 523 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gm24957-201ENSMUST00000179604 132 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Mir7008-201ENSMUST00000184398 63 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gm8419-201ENSMUST00000189886 412 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gm5990-201ENSMUST00000203126 746 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gm45724-201ENSMUST00000213031 420 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Cux1P53564 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cux1P53564 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC9.88□□□□□ -0.83
Cux1P53564 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Cux1P53564 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cux1P53564 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.88□□□□□ -0.83
Cux1P53564 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
Cux1P53564 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Cux1P53564 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Cux1P53564 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Cux1P53564 AC098728.1-202ENSMUST00000226656 2198 ntBASIC9.88□□□□□ -0.83
Cux1P53564 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms