Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm16420-201ENSMUST00000120258 856 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Gm12685-201ENSMUST00000121702 214 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Gm15529-201ENSMUST00000121833 994 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm22895-201ENSMUST00000157508 308 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Gm25019-201ENSMUST00000179732 110 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Mir6992-201ENSMUST00000183342 109 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm29357-201ENSMUST00000186877 698 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Gm43160-201ENSMUST00000196453 421 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Gm10095-201ENSMUST00000222765 483 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.64□□□□□ -1.03
Col18a1P39061 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm5386-201ENSMUST00000121749 2450 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
Col18a1P39061 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm38001-201ENSMUST00000192900 3761 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.64□□□□□ -1.03
Col18a1P39061 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm5381-201ENSMUST00000117975 1250 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm13207-201ENSMUST00000119862 773 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm13924-201ENSMUST00000119899 486 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm25487-201ENSMUST00000158725 125 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm18728-201ENSMUST00000186155 753 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC8.63□□□□□ -1.03
Col18a1P39061 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm7838-201ENSMUST00000203221 1189 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm2225-201ENSMUST00000209570 377 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 AC102287.1-201ENSMUST00000211412 454 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
Col18a1P39061 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col18a1P39061 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col18a1P39061 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Col18a1P39061 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col18a1P39061 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm22592-201ENSMUST00000104242 131 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm14836-201ENSMUST00000118567 471 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm18325-201ENSMUST00000203228 835 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm34701-202ENSMUST00000204685 360 ntBASIC8.63□□□□□ -1.03
Col18a1P39061 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Col18a1P39061 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Col18a1P39061 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Col18a1P39061 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.62□□□□□ -1.03
Col18a1P39061 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Gm44620-201ENSMUST00000209183 2887 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC8.62□□□□□ -1.03
Col18a1P39061 Gm8855-201ENSMUST00000118888 878 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Gm14520-201ENSMUST00000119258 387 ntBASIC8.62□□□□□ -1.03
Col18a1P39061 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Col18a1P39061 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Col18a1P39061 Gm28061-201ENSMUST00000189085 807 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms