Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm14356-201ENSMUST00000118322 869 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm6693-201ENSMUST00000189583 813 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Gm44360-201ENSMUST00000200081 82 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm10688-201ENSMUST00000214985 520 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.35□□□□□ -1.23
Col2a1P28481 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Col2a1P28481 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col2a1P28481 Gm38299-201ENSMUST00000193214 3789 ntBASIC7.35□□□□□ -1.23
Col2a1P28481 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm37589-201ENSMUST00000193609 3994 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm232-201ENSMUST00000216549 2559 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm24733-201ENSMUST00000158863 253 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Gm6541-201ENSMUST00000165542 561 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Gm23164-201ENSMUST00000175084 111 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.34□□□□□ -1.23
Col2a1P28481 Mir7037-201ENSMUST00000184414 65 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm8241-201ENSMUST00000189286 816 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm43561-201ENSMUST00000199866 448 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm9292-201ENSMUST00000222008 710 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Col2a1P28481 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col2a1P28481 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col2a1P28481 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col2a1P28481 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.34□□□□□ -1.23
Col2a1P28481 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
Col2a1P28481 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Col2a1P28481 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col2a1P28481 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Col2a1P28481 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col2a1P28481 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Col2a1P28481 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Col2a1P28481 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.33□□□□□ -1.24
Col2a1P28481 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm16557-201ENSMUST00000159182 191 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Gm27849-201ENSMUST00000183673 125 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.33□□□□□ -1.24
Col2a1P28481 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.33□□□□□ -1.24
Col2a1P28481 Ighv1-27-201ENSMUST00000194473 340 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Gm37477-201ENSMUST00000195215 884 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Gm18628-201ENSMUST00000220584 475 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Col2a1P28481 Olfr467-201ENSMUST00000084756 927 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Col2a1P28481 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Col2a1P28481 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.33□□□□□ -1.24
Col2a1P28481 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Col2a1P28481 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.32□□□□□ -1.24
Col2a1P28481 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col2a1P28481 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 978.6 ms