Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TP20293 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
TP20293 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
TP20293 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
TP20293 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.21□□□□□ -1.41
TP20293 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TP20293 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
TP20293 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.21□□□□□ -1.42
TP20293 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.21□□□□□ -1.42
TP20293 Mir678-201ENSMUST00000102114 84 ntBASIC6.21□□□□□ -1.42
TP20293 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TP20293 Gm23748-201ENSMUST00000104227 131 ntBASIC6.21□□□□□ -1.42
TP20293 Gm11501-201ENSMUST00000118039 581 ntBASIC6.21□□□□□ -1.42
TP20293 Gm13740-201ENSMUST00000120590 310 ntBASIC6.21□□□□□ -1.42
TP20293 Gm7746-201ENSMUST00000120966 503 ntBASIC6.21□□□□□ -1.42
TP20293 Gm8577-201ENSMUST00000122420 986 ntBASIC6.21□□□□□ -1.42
TP20293 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Gm11962-201ENSMUST00000145746 255 ntBASIC6.21□□□□□ -1.42
TP20293 Gm23031-201ENSMUST00000157998 119 ntBASIC6.21□□□□□ -1.42
TP20293 Gm6434-201ENSMUST00000163316 372 ntBASIC6.21□□□□□ -1.42
TP20293 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.21□□□□□ -1.42
TP20293 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.21□□□□□ -1.42
TP20293 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.21□□□□□ -1.42
TP20293 Gm23810-201ENSMUST00000175150 74 ntBASIC6.21□□□□□ -1.42
TP20293 Gm20615-201ENSMUST00000177503 705 ntBASIC6.21□□□□□ -1.42
TP20293 Gm25617-201ENSMUST00000179548 133 ntBASIC6.21□□□□□ -1.42
TP20293 Gm27185-201ENSMUST00000184296 247 ntBASIC6.21□□□□□ -1.42
TP20293 Mir7058-201ENSMUST00000184637 75 ntBASIC6.21□□□□□ -1.42
TP20293 Gm28117-201ENSMUST00000188472 371 ntBASIC6.21□□□□□ -1.42
TP20293 Gm36965-201ENSMUST00000193797 394 ntBASIC6.21□□□□□ -1.42
TP20293 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Gm43160-201ENSMUST00000196453 421 ntBASIC6.21□□□□□ -1.42
TP20293 Gm25617-202ENSMUST00000198387 132 ntBASIC6.21□□□□□ -1.42
TP20293 Gm44411-201ENSMUST00000204172 349 ntBASIC6.21□□□□□ -1.42
TP20293 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.21□□□□□ -1.42
TP20293 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.21□□□□□ -1.42
TP20293 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.21□□□□□ -1.42
TP20293 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TP20293 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.21□□□□□ -1.42
TP20293 Gm17849-201ENSMUST00000219788 853 ntBASIC6.21□□□□□ -1.42
TP20293 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.21□□□□□ -1.42
TP20293 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.21□□□□□ -1.42
TP20293 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.21□□□□□ -1.42
TP20293 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Gm24621-201ENSMUST00000082679 140 ntBASIC6.21□□□□□ -1.42
TP20293 Mir106b-201ENSMUST00000083580 82 ntBASIC6.21□□□□□ -1.42
TP20293 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.21□□□□□ -1.42
TP20293 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TP20293 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.21□□□□□ -1.42
TP20293 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
TP20293 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TP20293 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TP20293 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
TP20293 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.21□□□□□ -1.42
TP20293 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.21□□□□□ -1.42
TP20293 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.21□□□□□ -1.42
TP20293 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.21□□□□□ -1.42
TP20293 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC6.21□□□□□ -1.42
TP20293 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TP20293 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TP20293 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TP20293 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.2□□□□□ -1.42
TP20293 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.2□□□□□ -1.42
TP20293 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.2□□□□□ -1.42
TP20293 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TP20293 Gm2178-201ENSMUST00000104927 357 ntBASIC6.2□□□□□ -1.42
TP20293 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Gm11972-201ENSMUST00000118514 389 ntBASIC6.2□□□□□ -1.42
TP20293 Gm15149-201ENSMUST00000119370 360 ntBASIC6.2□□□□□ -1.42
TP20293 Gm11370-201ENSMUST00000120583 260 ntBASIC6.2□□□□□ -1.42
TP20293 Gm11689-201ENSMUST00000120766 302 ntBASIC6.2□□□□□ -1.42
TP20293 Gm5166-201ENSMUST00000121332 573 ntBASIC6.2□□□□□ -1.42
TP20293 Gm14353-201ENSMUST00000122200 869 ntBASIC6.2□□□□□ -1.42
TP20293 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.2□□□□□ -1.42
TP20293 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.2□□□□□ -1.42
TP20293 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.2□□□□□ -1.42
TP20293 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.2□□□□□ -1.42
TP20293 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TP20293 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.2□□□□□ -1.42
TP20293 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.2□□□□□ -1.42
TP20293 Gm29072-201ENSMUST00000191149 678 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms