Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm42572-201ENSMUST00000202292 3378 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Hoxd3P09027 AC117656.3-203ENSMUST00000225007 1809 ntBASIC6.4□□□□□ -1.38
Hoxd3P09027 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.4□□□□□ -1.39
Hoxd3P09027 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gm37673-201ENSMUST00000194880 2451 ntBASIC6.4□□□□□ -1.39
Hoxd3P09027 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Sun1-206ENSMUST00000110884 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Hoxd3P09027 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Hoxd3P09027 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 AC115744.1-201ENSMUST00000222398 2379 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm4451-201ENSMUST00000186000 1891 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm12075-201ENSMUST00000117426 397 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm15209-201ENSMUST00000117703 400 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm14918-201ENSMUST00000118153 268 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm15753-201ENSMUST00000119241 1062 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm12307-201ENSMUST00000120581 590 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm13633-201ENSMUST00000120668 898 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm5883-201ENSMUST00000120735 495 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm12152-201ENSMUST00000122465 684 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm7870-201ENSMUST00000184467 616 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Mir6919-201ENSMUST00000185146 62 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm18301-201ENSMUST00000185261 888 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm9120-201ENSMUST00000190835 994 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm16273-201ENSMUST00000202238 268 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm44254-201ENSMUST00000204184 322 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm43934-201ENSMUST00000205095 388 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm18060-201ENSMUST00000207407 564 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 AC152946.2-201ENSMUST00000219071 337 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Zfp637-211ENSMUST00000223041 1128 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hoxd3P09027 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Olfr519-201ENSMUST00000084752 960 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm8728-201ENSMUST00000207367 2178 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm8486-201ENSMUST00000207508 2171 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm8685-201ENSMUST00000207567 2183 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Gm16443-201ENSMUST00000207909 2184 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Hoxd3P09027 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Hoxd3P09027 AC153862.1-201ENSMUST00000215700 3349 ntBASIC6.39□□□□□ -1.39
Hoxd3P09027 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms