Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm15209-201ENSMUST00000117703 400 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Mup-ps14-201ENSMUST00000118437 532 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm9208-201ENSMUST00000120468 948 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm12307-201ENSMUST00000120581 590 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm12101-201ENSMUST00000121590 390 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm25435-201ENSMUST00000158277 267 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm24824-201ENSMUST00000175097 78 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm22132-201ENSMUST00000175316 100 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm18415-201ENSMUST00000177464 647 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm5345-201ENSMUST00000183076 1014 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm27348-201ENSMUST00000184511 170 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm42509-201ENSMUST00000197390 781 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm44988-201ENSMUST00000203835 1161 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 AC168880.1-201ENSMUST00000225113 707 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Mir425-201ENSMUST00000083645 85 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
NpcdF8VQB8 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.53□□□□□ -1.04
NpcdF8VQB8 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
NpcdF8VQB8 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.52□□□□□ -1.04
NpcdF8VQB8 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
NpcdF8VQB8 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm9597-202ENSMUST00000227632 1387 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Snord65-201ENSMUST00000104269 72 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm24069-201ENSMUST00000104512 127 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm13352-201ENSMUST00000117515 262 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm14865-201ENSMUST00000117523 494 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm15203-201ENSMUST00000117668 455 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm5319-201ENSMUST00000118965 873 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm7212-201ENSMUST00000120817 348 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Sms-ps-201ENSMUST00000121773 1101 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm15242-201ENSMUST00000122459 283 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm23082-201ENSMUST00000157852 133 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm25557-201ENSMUST00000158084 315 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm27854-201ENSMUST00000175578 244 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm44221-201ENSMUST00000203552 388 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm45379-201ENSMUST00000211772 549 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 Gm4042-201ENSMUST00000216946 637 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC8.52□□□□□ -1.05
NpcdF8VQB8 AC173482.2-201ENSMUST00000224044 750 ntBASIC8.52□□□□□ -1.05
NpcdF8VQB8 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms