Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm23323-201ENSMUST00000104471 133 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm15203-201ENSMUST00000117668 455 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm12477-201ENSMUST00000121221 571 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm14787-201ENSMUST00000121236 388 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm14156-201ENSMUST00000121538 483 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 BC002163-201ENSMUST00000121906 319 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm15079-201ENSMUST00000121943 216 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm22186-201ENSMUST00000157822 122 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm24190-201ENSMUST00000157976 216 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm18033-201ENSMUST00000186678 550 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm29008-201ENSMUST00000189387 298 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm28164-201ENSMUST00000190143 442 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm8891-201ENSMUST00000198546 832 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm45912-201ENSMUST00000210646 543 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 AC154738.2-201ENSMUST00000227403 1110 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm14797-201ENSMUST00000119378 1480 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdh1F7BJK1 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm25167-201ENSMUST00000104188 120 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm14931-201ENSMUST00000111079 253 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm15159-201ENSMUST00000117062 764 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm15616-201ENSMUST00000118662 375 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm13988-201ENSMUST00000119363 288 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm12361-201ENSMUST00000119806 1044 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm16053-201ENSMUST00000120511 188 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm15158-201ENSMUST00000120577 570 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm12313-201ENSMUST00000121347 421 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Samd15-201ENSMUST00000169669 1194 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Mir7115-201ENSMUST00000184275 64 ntBASIC6.43□□□□□ -1.38
Pcdh1F7BJK1 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms