Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm21728-201ENSMUST00000188442 695 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm21889-201ENSMUST00000188487 695 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20932-201ENSMUST00000189115 694 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm21920-201ENSMUST00000190042 695 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm37265-201ENSMUST00000191698 885 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm37758-201ENSMUST00000194275 629 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm5306-201ENSMUST00000203325 757 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm45724-201ENSMUST00000213031 420 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm3785-201ENSMUST00000221000 202 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Gm16415-201ENSMUST00000080097 489 ntBASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Col4a6B1AVK5 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm24957-201ENSMUST00000179604 132 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm7780-201ENSMUST00000214787 406 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col4a6B1AVK5 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm12937-201ENSMUST00000118333 448 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm13604-201ENSMUST00000119332 482 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm35013-201ENSMUST00000197218 832 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.65□□□□□ -1.35
Col4a6B1AVK5 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.65□□□□□ -1.35
Col4a6B1AVK5 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm45191-201ENSMUST00000205846 5439 ntBASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col4a6B1AVK5 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms