Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm11501-201ENSMUST00000118039 581 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm27507-201ENSMUST00000184199 93 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm21728-201ENSMUST00000188442 695 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm21889-201ENSMUST00000188487 695 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20932-201ENSMUST00000189115 694 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm21920-201ENSMUST00000190042 695 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm38030-201ENSMUST00000192376 475 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm36965-201ENSMUST00000193797 394 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm43377-201ENSMUST00000201640 455 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm44856-201ENSMUST00000206639 304 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm2767-201ENSMUST00000209582 473 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm24405-201ENSMUST00000083033 167 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Trim3Q9R1R2 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm25760-201ENSMUST00000103989 132 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Snord88a-201ENSMUST00000116723 90 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm7571-201ENSMUST00000120252 927 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm12778-201ENSMUST00000122341 333 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm26046-201ENSMUST00000157312 166 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm25717-201ENSMUST00000158631 353 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm24735-201ENSMUST00000158859 118 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm2619-202ENSMUST00000166777 651 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm21392-201ENSMUST00000182950 972 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm37383-201ENSMUST00000191750 745 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm35323-201ENSMUST00000191836 499 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm43243-201ENSMUST00000199964 278 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm44279-201ENSMUST00000205154 472 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm45122-201ENSMUST00000206376 784 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm44705-201ENSMUST00000206719 339 ntBASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim3Q9R1R2 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms