Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Lima1Q9ERG0 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm16418-201ENSMUST00000118577 171 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm22533-201ENSMUST00000158821 274 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm6489-201ENSMUST00000178167 696 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Mir6367-201ENSMUST00000183385 102 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm17822-201ENSMUST00000204307 351 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm9652-201ENSMUST00000209345 163 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm17997-201ENSMUST00000211801 840 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm9788-201ENSMUST00000057038 906 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Lima1Q9ERG0 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm25396-201ENSMUST00000103981 133 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm13141-201ENSMUST00000117417 456 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Mir7685-201ENSMUST00000183555 62 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm38170-201ENSMUST00000195404 816 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm5711-201ENSMUST00000197896 421 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm44243-201ENSMUST00000204323 692 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm45279-201ENSMUST00000210315 391 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Lima1Q9ERG0 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms