Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm14865-201ENSMUST00000117523 494 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm24781-201ENSMUST00000157636 117 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm8192-201ENSMUST00000182196 958 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm38068-201ENSMUST00000192546 540 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm5711-201ENSMUST00000197896 421 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm43436-201ENSMUST00000199308 147 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm7413-201ENSMUST00000219498 462 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm22684-201ENSMUST00000082849 132 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Smc1aQ9CU62 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm26340-201ENSMUST00000102365 99 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm25724-201ENSMUST00000104531 117 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm14550-201ENSMUST00000117918 407 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm15048-201ENSMUST00000118201 954 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm13930-201ENSMUST00000118569 368 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm4992-201ENSMUST00000120256 768 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm14070-201ENSMUST00000120773 428 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm16016-201ENSMUST00000120831 550 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm6451-201ENSMUST00000121488 717 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm15164-201ENSMUST00000122203 271 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm18012-201ENSMUST00000204558 773 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm45626-201ENSMUST00000210093 361 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Gm5436-201ENSMUST00000058103 643 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.37□□□□□ -1.23
Smc1aQ9CU62 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms