Protein–RNA interactions for Protein: Q9CPX6

Atg3, Ubiquitin-like-conjugating enzyme ATG3, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg3Q9CPX6 Gm15096-201ENSMUST00000121918 878 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm23884-201ENSMUST00000122687 294 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm22530-201ENSMUST00000158820 118 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm17366-201ENSMUST00000167629 187 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm27460-201ENSMUST00000184213 100 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm37493-201ENSMUST00000193167 433 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm3351-201ENSMUST00000193454 505 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm9710-201ENSMUST00000198053 499 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm18838-201ENSMUST00000204855 886 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm33178-201ENSMUST00000212090 257 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 AC154646.1-201ENSMUST00000225011 1092 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Gm5612-201ENSMUST00000053326 375 ntBASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Atg3Q9CPX6 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm3076-201ENSMUST00000161613 451 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm38122-201ENSMUST00000192679 885 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm45610-201ENSMUST00000209227 784 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 A1cf-203ENSMUST00000224400 1204 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg3Q9CPX6 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.4□□□□□ -1.07
Atg3Q9CPX6 AC022775.1-201ENSMUST00000228163 2698 ntBASIC8.4□□□□□ -1.07
Atg3Q9CPX6 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Atg3Q9CPX6 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Atg3Q9CPX6 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm15621-201ENSMUST00000119162 364 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm14038-201ENSMUST00000121500 807 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm9428-201ENSMUST00000127214 769 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm24395-201ENSMUST00000158139 125 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Mir5107-201ENSMUST00000175586 88 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Mir7211-201ENSMUST00000184071 63 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm7891-201ENSMUST00000190284 843 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm37380-201ENSMUST00000193752 397 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm17824-201ENSMUST00000197690 805 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm33312-201ENSMUST00000222443 332 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Atg3Q9CPX6 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms