Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm37783-201ENSMUST00000192025 1856 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm15233-201ENSMUST00000118747 400 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm37203-201ENSMUST00000191618 385 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Col6a6Q8C6K9 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm22714-201ENSMUST00000116894 78 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm16179-201ENSMUST00000120685 373 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm25824-201ENSMUST00000157092 121 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm5708-201ENSMUST00000196289 886 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm12754-201ENSMUST00000121908 454 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm12650-201ENSMUST00000121966 258 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm23740-201ENSMUST00000157385 100 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm16164-201ENSMUST00000160078 468 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm20397-201ENSMUST00000174520 362 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm29197-201ENSMUST00000185922 702 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm7731-201ENSMUST00000091759 470 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.87□□□□□ -1.47
Col6a6Q8C6K9 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 AC156636.2-201ENSMUST00000218845 4557 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm37216-201ENSMUST00000193817 3478 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm8534-201ENSMUST00000118553 766 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm38181-201ENSMUST00000181357 720 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm28080-201ENSMUST00000188552 722 ntBASIC5.86□□□□□ -1.47
Col6a6Q8C6K9 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms