Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Mir674-201ENSMUST00000102421 100 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm13265-201ENSMUST00000118090 421 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm11972-201ENSMUST00000118514 389 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm9440-201ENSMUST00000119667 539 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm12229-201ENSMUST00000120487 468 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm15316-201ENSMUST00000121082 421 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm12978-201ENSMUST00000121250 522 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm5809-201ENSMUST00000121854 529 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm20691-201ENSMUST00000176889 333 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm20615-201ENSMUST00000177503 705 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Mir6337-201ENSMUST00000184194 105 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm29141-201ENSMUST00000190357 882 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm29107-201ENSMUST00000190910 347 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm37072-201ENSMUST00000194570 837 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm4290-201ENSMUST00000206897 814 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 AC118006.2-201ENSMUST00000224167 962 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Olfr844-201ENSMUST00000054106 930 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm24405-201ENSMUST00000083033 167 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sp140Q6NSQ5 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm23748-201ENSMUST00000104227 131 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm24781-201ENSMUST00000157636 117 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm22533-201ENSMUST00000158821 274 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm3585-201ENSMUST00000173438 875 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm26381-201ENSMUST00000174895 92 ntBASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.75□□□□□ -1.33
Sp140Q6NSQ5 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms