Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 n-R5s173-201ENSMUST00000082620 119 ntBASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Gm23330-201ENSMUST00000082660 164 ntBASIC8.01□□□□□ -1.13
Shank3Q4ACU6 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Gm43190-201ENSMUST00000187850 1779 ntBASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shank3Q4ACU6 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm8323-201ENSMUST00000168436 1201 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm2877-201ENSMUST00000178248 1204 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm8324-201ENSMUST00000178911 1204 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm2871-201ENSMUST00000179984 1204 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm29159-201ENSMUST00000187969 379 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm44382-201ENSMUST00000198683 122 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 AC122332.1-201ENSMUST00000214384 285 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 AC123832.2-201ENSMUST00000215151 129 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC8□□□□□ -1.13
Shank3Q4ACU6 CT025616.1-201ENSMUST00000221158 412 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm7205-201ENSMUST00000196032 1323 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm20045-201ENSMUST00000192658 5577 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm37943-201ENSMUST00000194053 3944 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm7713-201ENSMUST00000181201 1007 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm43105-201ENSMUST00000202987 459 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm8667-201ENSMUST00000211112 449 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm5830-201ENSMUST00000049117 443 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shank3Q4ACU6 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shank3Q4ACU6 Gm43187-201ENSMUST00000200652 2397 ntBASIC8□□□□□ -1.13
Shank3Q4ACU6 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm20486-201ENSMUST00000101544 128 ntBASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm12399-201ENSMUST00000121475 446 ntBASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Shank3Q4ACU6 Gm21728-201ENSMUST00000188442 695 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms