Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC6.91□□□□□ -1.3
Msx2Q03358 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.91□□□□□ -1.3
Msx2Q03358 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Msx2Q03358 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msx2Q03358 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msx2Q03358 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.91□□□□□ -1.3
Msx2Q03358 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm7785-201ENSMUST00000117121 892 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm14621-201ENSMUST00000117709 689 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm13858-201ENSMUST00000118862 671 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm13459-201ENSMUST00000121558 646 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm22024-201ENSMUST00000122733 287 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm25266-201ENSMUST00000158521 304 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Msx2Q03358 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm2951-201ENSMUST00000169447 490 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm2930-201ENSMUST00000170403 474 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm4891-201ENSMUST00000182279 912 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm28677-202ENSMUST00000186904 615 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm28413-201ENSMUST00000189369 291 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm38261-201ENSMUST00000192608 316 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm44356-201ENSMUST00000196731 111 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm23011-202ENSMUST00000197855 275 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm4859-201ENSMUST00000199625 787 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm7565-201ENSMUST00000203611 623 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 AC115047.1-201ENSMUST00000213795 322 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC6.9□□□□□ -1.3
Msx2Q03358 AC163631.1-201ENSMUST00000225041 598 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msx2Q03358 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msx2Q03358 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msx2Q03358 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm23970-201ENSMUST00000083319 107 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Gm24924-201ENSMUST00000084007 164 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msx2Q03358 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.9□□□□□ -1.3
Msx2Q03358 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msx2Q03358 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Msx2Q03358 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
Msx2Q03358 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Msx2Q03358 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msx2Q03358 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Msx2Q03358 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.9□□□□□ -1.31
Msx2Q03358 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msx2Q03358 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Msx2Q03358 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msx2Q03358 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.9□□□□□ -1.31
Msx2Q03358 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Msx2Q03358 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Msx2Q03358 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.89□□□□□ -1.31
Msx2Q03358 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Msx2Q03358 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msx2Q03358 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.89□□□□□ -1.31
Msx2Q03358 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msx2Q03358 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msx2Q03358 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msx2Q03358 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Msx2Q03358 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msx2Q03358 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msx2Q03358 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.89□□□□□ -1.31
Msx2Q03358 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msx2Q03358 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Msx2Q03358 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msx2Q03358 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Msx2Q03358 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms