Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CiitaP79621 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CiitaP79621 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Gm15186-201ENSMUST00000119345 563 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.16□□□□□ -1.26
CiitaP79621 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.16□□□□□ -1.26
CiitaP79621 Gm22223-201ENSMUST00000157360 125 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.16□□□□□ -1.26
CiitaP79621 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.16□□□□□ -1.26
CiitaP79621 Gm26381-201ENSMUST00000174895 92 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Gm7554-201ENSMUST00000202282 574 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Gm19340-201ENSMUST00000221995 345 ntBASIC7.16□□□□□ -1.26
CiitaP79621 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CiitaP79621 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Gm2531-201ENSMUST00000075609 512 ntBASIC7.16□□□□□ -1.26
CiitaP79621 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Gm24695-201ENSMUST00000083877 83 ntBASIC7.16□□□□□ -1.26
CiitaP79621 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CiitaP79621 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CiitaP79621 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.16□□□□□ -1.26
CiitaP79621 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.16□□□□□ -1.26
CiitaP79621 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CiitaP79621 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.16□□□□□ -1.26
CiitaP79621 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
CiitaP79621 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.15□□□□□ -1.26
CiitaP79621 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CiitaP79621 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm26144-201ENSMUST00000104475 132 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm15502-201ENSMUST00000121449 208 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Gm23071-201ENSMUST00000158242 115 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm23259-201ENSMUST00000158318 303 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm3344-201ENSMUST00000169610 603 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm29663-201ENSMUST00000186962 853 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm37189-201ENSMUST00000192131 298 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm44213-201ENSMUST00000204977 703 ntBASIC7.15□□□□□ -1.26
CiitaP79621 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.15□□□□□ -1.26
CiitaP79621 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CiitaP79621 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CiitaP79621 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.15□□□□□ -1.26
CiitaP79621 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CiitaP79621 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
CiitaP79621 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CiitaP79621 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CiitaP79621 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CiitaP79621 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.15□□□□□ -1.27
CiitaP79621 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CiitaP79621 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CiitaP79621 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.15□□□□□ -1.27
CiitaP79621 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
CiitaP79621 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CiitaP79621 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
CiitaP79621 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CiitaP79621 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.14□□□□□ -1.27
CiitaP79621 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CiitaP79621 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CiitaP79621 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms