Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.08□□□□□ -1.28
NcanP55066 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.07□□□□□ -1.28
NcanP55066 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NcanP55066 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.07□□□□□ -1.28
NcanP55066 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.07□□□□□ -1.28
NcanP55066 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.07□□□□□ -1.28
NcanP55066 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NcanP55066 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC7.07□□□□□ -1.28
NcanP55066 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Gm6808-201ENSMUST00000162341 807 ntBASIC7.07□□□□□ -1.28
NcanP55066 Gm9064-201ENSMUST00000163579 566 ntBASIC7.07□□□□□ -1.28
NcanP55066 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.07□□□□□ -1.28
NcanP55066 Gm7713-201ENSMUST00000181201 1007 ntBASIC7.07□□□□□ -1.28
NcanP55066 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.07□□□□□ -1.28
NcanP55066 Gm4332-201ENSMUST00000196114 346 ntBASIC7.07□□□□□ -1.28
NcanP55066 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.07□□□□□ -1.28
NcanP55066 Gm42663-201ENSMUST00000199883 351 ntBASIC7.07□□□□□ -1.28
NcanP55066 Gm44265-201ENSMUST00000203631 465 ntBASIC7.07□□□□□ -1.28
NcanP55066 Gm45850-201ENSMUST00000212536 338 ntBASIC7.07□□□□□ -1.28
NcanP55066 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.07□□□□□ -1.28
NcanP55066 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.07□□□□□ -1.28
NcanP55066 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
NcanP55066 Gm24525-201ENSMUST00000082917 151 ntBASIC7.07□□□□□ -1.28
NcanP55066 Mir133b-201ENSMUST00000083546 119 ntBASIC7.07□□□□□ -1.28
NcanP55066 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.07□□□□□ -1.28
NcanP55066 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.07□□□□□ -1.28
NcanP55066 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.07□□□□□ -1.28
NcanP55066 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NcanP55066 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NcanP55066 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NcanP55066 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.06□□□□□ -1.28
NcanP55066 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NcanP55066 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.06□□□□□ -1.28
NcanP55066 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.06□□□□□ -1.28
NcanP55066 Gm5406-201ENSMUST00000120054 766 ntBASIC7.06□□□□□ -1.28
NcanP55066 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.06□□□□□ -1.28
NcanP55066 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
NcanP55066 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
NcanP55066 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Gm23408-201ENSMUST00000158523 265 ntBASIC7.06□□□□□ -1.28
NcanP55066 Gm22548-201ENSMUST00000174899 78 ntBASIC7.06□□□□□ -1.28
NcanP55066 Gm27006-201ENSMUST00000182218 943 ntBASIC7.06□□□□□ -1.28
NcanP55066 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC7.06□□□□□ -1.28
NcanP55066 Gm3605-201ENSMUST00000185858 440 ntBASIC7.06□□□□□ -1.28
NcanP55066 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NcanP55066 Gm5853-201ENSMUST00000197183 632 ntBASIC7.06□□□□□ -1.28
NcanP55066 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Gm7802-201ENSMUST00000216464 262 ntBASIC7.06□□□□□ -1.28
NcanP55066 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NcanP55066 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
NcanP55066 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.06□□□□□ -1.28
NcanP55066 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NcanP55066 AC183268.1-201ENSMUST00000215753 2837 ntBASIC7.06□□□□□ -1.28
NcanP55066 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
NcanP55066 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms