Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.34□□□□□ -1.07
Msh6P54276 AC154431.2-201ENSMUST00000225215 1055 ntBASIC8.34□□□□□ -1.07
Msh6P54276 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.34□□□□□ -1.07
Msh6P54276 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Msh6P54276 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.34□□□□□ -1.08
Msh6P54276 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Msh6P54276 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Gm13615-201ENSMUST00000120242 1612 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.33□□□□□ -1.08
Msh6P54276 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC8.33□□□□□ -1.08
Msh6P54276 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
Msh6P54276 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Msh6P54276 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Msh6P54276 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Gm16511-201ENSMUST00000120019 564 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Gm23071-201ENSMUST00000158242 115 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Gm24179-201ENSMUST00000158925 127 ntBASIC8.33□□□□□ -1.08
Msh6P54276 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Gm29160-201ENSMUST00000190094 699 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Gm21524-201ENSMUST00000190499 696 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Gm21715-201ENSMUST00000191056 694 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.33□□□□□ -1.08
Msh6P54276 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.33□□□□□ -1.08
Msh6P54276 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Msh6P54276 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Msh6P54276 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Gm26067-201ENSMUST00000103789 110 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Gm13400-201ENSMUST00000117436 380 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Gm14158-201ENSMUST00000118409 308 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Calr-ps-201ENSMUST00000121776 485 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Gm23884-201ENSMUST00000122687 294 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC8.32□□□□□ -1.08
Msh6P54276 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.32□□□□□ -1.08
Msh6P54276 Gm20778-201ENSMUST00000178524 627 ntBASIC8.32□□□□□ -1.08
Msh6P54276 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Mir6361-201ENSMUST00000185079 101 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Gm43354-201ENSMUST00000196862 346 ntBASIC8.32□□□□□ -1.08
Msh6P54276 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.32□□□□□ -1.08
Msh6P54276 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.32□□□□□ -1.08
Msh6P54276 Gm8256-203ENSMUST00000228692 591 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Msh6P54276 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Msh6P54276 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Msh6P54276 Gm8872-201ENSMUST00000197475 1341 ntBASIC8.32□□□□□ -1.08
Msh6P54276 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Msh6P54276 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Msh6P54276 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Msh6P54276 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC8.31□□□□□ -1.08
Msh6P54276 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Msh6P54276 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.31□□□□□ -1.08
Msh6P54276 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Msh6P54276 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Msh6P54276 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC8.31□□□□□ -1.08
Msh6P54276 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Mir3473e-201ENSMUST00000183932 110 ntBASIC8.31□□□□□ -1.08
Msh6P54276 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC8.31□□□□□ -1.08
Msh6P54276 Gm44239-201ENSMUST00000204228 271 ntBASIC8.31□□□□□ -1.08
Msh6P54276 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Msh6P54276 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Msh6P54276 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Msh6P54276 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms