Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.58□□□□□ -1.36
Hoxc11P31313 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxc11P31313 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxc11P31313 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxc11P31313 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxc11P31313 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxc11P31313 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.58□□□□□ -1.36
Hoxc11P31313 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxc11P31313 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxc11P31313 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.58□□□□□ -1.36
Hoxc11P31313 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxc11P31313 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Pramel-201ENSMUST00000118979 1383 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm6654-201ENSMUST00000118950 348 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm24812-201ENSMUST00000175315 284 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm8826-201ENSMUST00000193161 948 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm37328-201ENSMUST00000193191 640 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm37349-201ENSMUST00000194205 624 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm43212-201ENSMUST00000198208 394 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm44412-201ENSMUST00000203018 294 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm44237-201ENSMUST00000205183 936 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm4042-201ENSMUST00000216946 637 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm19116-201ENSMUST00000218592 642 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Hoxc11P31313 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Desi2-202ENSMUST00000069568 1193 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm29486-201ENSMUST00000088648 372 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm18719-201ENSMUST00000196696 1413 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxc11P31313 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxc11P31313 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxc11P31313 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxc11P31313 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.56□□□□□ -1.36
Hoxc11P31313 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxc11P31313 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxc11P31313 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.56□□□□□ -1.36
Hoxc11P31313 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxc11P31313 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxc11P31313 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxc11P31313 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Hoxc11P31313 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Hoxc11P31313 Gm24473-201ENSMUST00000104483 131 ntBASIC6.56□□□□□ -1.36
Hoxc11P31313 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hoxc11P31313 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms