Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm20486-201ENSMUST00000101544 128 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Mir6367-201ENSMUST00000183385 102 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm44251-201ENSMUST00000204963 442 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 AC156037.1-201ENSMUST00000221133 127 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 AC125543.3-201ENSMUST00000221991 126 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.62□□□□□ -1.19
Col1a1P11087 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm26211-201ENSMUST00000158578 129 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm2058-201ENSMUST00000178791 560 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm43160-201ENSMUST00000196453 421 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.62□□□□□ -1.19
Col1a1P11087 Gm45473-201ENSMUST00000211452 616 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col1a1P11087 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Col1a1P11087 n-R5s36-201ENSMUST00000082998 119 ntBASIC7.62□□□□□ -1.19
Col1a1P11087 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 AC159308.1-201ENSMUST00000216615 1351 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col1a1P11087 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Col1a1P11087 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm23910-201ENSMUST00000104597 132 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm22724-201ENSMUST00000158091 127 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm25445-201ENSMUST00000158996 299 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm2959-201ENSMUST00000169844 621 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm38181-201ENSMUST00000181357 720 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm28080-201ENSMUST00000188552 722 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm37784-201ENSMUST00000193233 189 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm20770-201ENSMUST00000193474 694 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm5990-201ENSMUST00000203126 746 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm19116-201ENSMUST00000218592 642 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Gm36262-201ENSMUST00000223274 499 ntBASIC7.61□□□□□ -1.19
Col1a1P11087 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Col1a1P11087 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col1a1P11087 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Col1a1P11087 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms