Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Chmp6P0C0A3 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.09□□□□□ -1.27
Chmp6P0C0A3 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Chmp6P0C0A3 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Chmp6P0C0A3 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.09□□□□□ -1.27
Chmp6P0C0A3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Chmp6P0C0A3 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm24888-201ENSMUST00000104387 130 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm15216-201ENSMUST00000118058 277 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm14614-201ENSMUST00000119873 384 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm11504-201ENSMUST00000120211 173 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm7494-201ENSMUST00000121248 441 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm5283-201ENSMUST00000177874 334 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm43383-201ENSMUST00000195981 469 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Chmp6P0C0A3 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.08□□□□□ -1.28
Chmp6P0C0A3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm22231-201ENSMUST00000101027 73 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm23979-201ENSMUST00000104071 128 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm13768-201ENSMUST00000116469 929 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm11370-201ENSMUST00000120583 260 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm24781-201ENSMUST00000157636 117 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm25435-201ENSMUST00000158277 267 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm4202-201ENSMUST00000169025 733 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm20432-201ENSMUST00000173716 250 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm20549-201ENSMUST00000174804 429 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm25244-201ENSMUST00000178089 132 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm29605-201ENSMUST00000190800 292 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm43160-201ENSMUST00000196453 421 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Chmp6P0C0A3 Gm5436-201ENSMUST00000058103 643 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms