Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm44307-201ENSMUST00000204466 764 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm22501-201ENSMUST00000158981 127 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm26318-201ENSMUST00000176507 96 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm15490-201ENSMUST00000119894 387 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm7609-204ENSMUST00000161424 461 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Gm44108-201ENSMUST00000203525 422 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col6a3E9PWQ3 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm23879-201ENSMUST00000116874 126 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm8855-201ENSMUST00000118888 878 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Sin3a-207ENSMUST00000168502 4899 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm22204-201ENSMUST00000122654 327 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm27896-201ENSMUST00000175162 317 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Mir6410-201ENSMUST00000184204 104 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm46191-201ENSMUST00000218899 433 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm6068-201ENSMUST00000222270 387 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col6a3E9PWQ3 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms