Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm44075-201ENSMUST00000204208 216 ntBASIC7.22□□□□□ -1.25
Scn3aA2ASI5 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Gm38574-201ENSMUST00000211855 640 ntBASIC7.22□□□□□ -1.25
Scn3aA2ASI5 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Gm8526-201ENSMUST00000079153 475 ntBASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Scn3aA2ASI5 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm23485-201ENSMUST00000104181 155 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm15332-201ENSMUST00000118386 357 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm22276-201ENSMUST00000122469 129 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm12833-201ENSMUST00000136112 477 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm25342-201ENSMUST00000157459 122 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm23071-201ENSMUST00000158242 115 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Mir6361-201ENSMUST00000185079 101 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm44571-201ENSMUST00000208092 533 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.21□□□□□ -1.25
Scn3aA2ASI5 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Scn3aA2ASI5 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Gm13998-201ENSMUST00000120952 335 ntBASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Mir6911-201ENSMUST00000184241 69 ntBASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.21□□□□□ -1.26
Scn3aA2ASI5 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Scn3aA2ASI5 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm14755-201ENSMUST00000118037 384 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm14805-201ENSMUST00000120172 340 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm16164-201ENSMUST00000160078 468 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm6055-201ENSMUST00000180532 378 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm18952-201ENSMUST00000194471 846 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Scn3aA2ASI5 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms