Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Ddx56Q9D0R4 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm14729-201ENSMUST00000118373 689 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm12638-201ENSMUST00000119531 298 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm15129-201ENSMUST00000119673 279 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm14796-201ENSMUST00000121216 959 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm15586-201ENSMUST00000121218 528 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm13237-201ENSMUST00000122151 635 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm27315-201ENSMUST00000183977 154 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Mir6972-201ENSMUST00000184774 64 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Mir8120-201ENSMUST00000185035 139 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm29470-201ENSMUST00000188007 696 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm18645-202ENSMUST00000212222 760 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 AC106830.1-201ENSMUST00000228032 1003 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
Ddx56Q9D0R4 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm11726-201ENSMUST00000121028 424 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm25722-201ENSMUST00000157498 279 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm22214-201ENSMUST00000157563 172 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm15508-201ENSMUST00000160330 325 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm17063-201ENSMUST00000168135 456 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm6061-201ENSMUST00000175860 492 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm27617-201ENSMUST00000184321 168 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm27178-201ENSMUST00000184962 340 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Trbv9-201ENSMUST00000194494 290 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm6077-201ENSMUST00000196008 499 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm43478-201ENSMUST00000200381 292 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm45269-201ENSMUST00000210359 282 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 AC192088.2-201ENSMUST00000227590 411 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 AC098742.1-201ENSMUST00000227945 373 ntBASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Ddx56Q9D0R4 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms