Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Gm40309-201ENSMUST00000202699 1752 ntBASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Gm43280-201ENSMUST00000202958 1550 ntBASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 AC170999.1-201ENSMUST00000226359 1585 ntBASIC8.14□□□□□ -1.11
Pcdhb3Q91XZ7 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Slc30a6-201ENSMUST00000024870 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Slc50a1-202ENSMUST00000107460 785 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm11386-201ENSMUST00000117761 347 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13254-201ENSMUST00000118295 654 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm13224-201ENSMUST00000119586 94 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm9670-201ENSMUST00000121201 540 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15864-201ENSMUST00000145950 369 ntTSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15179-202ENSMUST00000152799 671 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm26271-201ENSMUST00000158349 104 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm6726-201ENSMUST00000172786 681 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Mir6411-201ENSMUST00000183556 108 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm21013-201ENSMUST00000184952 1201 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Mir8097-201ENSMUST00000185150 119 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm28579-201ENSMUST00000186143 369 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm20561-201ENSMUST00000188131 292 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37828-201ENSMUST00000192496 432 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37119-201ENSMUST00000195691 389 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm44465-201ENSMUST00000199536 114 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm42654-201ENSMUST00000200789 494 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm44892-201ENSMUST00000208595 488 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 AC134334.1-201ENSMUST00000214277 255 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr936-202ENSMUST00000216912 937 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm29807-201ENSMUST00000220161 372 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm7695-201ENSMUST00000220900 641 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 AC125350.5-201ENSMUST00000226102 517 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Tmem209-201ENSMUST00000064330 1679 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 CT025675.1-201ENSMUST00000228171 1567 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Gm37780-201ENSMUST00000194117 1873 ntBASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Pcdhb3Q91XZ7 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm19683-201ENSMUST00000209748 1781 ntBASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 CT010465.1-202ENSMUST00000221816 1355 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb3Q91XZ7 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms