Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm25057-201ENSMUST00000157366 88 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm44370-201ENSMUST00000175436 112 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Mir6367-201ENSMUST00000183385 102 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm29141-201ENSMUST00000190357 882 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm44342-201ENSMUST00000196874 129 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm44383-201ENSMUST00000198940 129 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm43089-201ENSMUST00000199162 275 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm17822-201ENSMUST00000204307 351 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm18838-201ENSMUST00000204855 886 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm4042-201ENSMUST00000216946 637 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm19056-201ENSMUST00000218220 797 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm13604-201ENSMUST00000119332 482 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm5387-201ENSMUST00000119776 857 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm11726-201ENSMUST00000121028 424 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm14156-201ENSMUST00000121538 483 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm22025-201ENSMUST00000122734 302 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm9064-201ENSMUST00000163579 566 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm5456-201ENSMUST00000170706 844 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Mir5100-201ENSMUST00000174993 64 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm17045-201ENSMUST00000178600 844 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm27360-201ENSMUST00000183487 80 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm43377-201ENSMUST00000201640 455 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Lsm1Q8VC85 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms