Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm18838-201ENSMUST00000204855 886 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm25795-201ENSMUST00000104421 132 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Calr-ps-201ENSMUST00000121776 485 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm12754-201ENSMUST00000121908 454 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Mir3473a-201ENSMUST00000175011 78 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm29197-201ENSMUST00000185922 702 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm8480-201ENSMUST00000190350 698 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 n-TStga1-201ENSMUST00000199903 109 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm45514-201ENSMUST00000211531 689 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 AC132384.6-201ENSMUST00000218976 1206 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm24919-201ENSMUST00000083020 106 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Olfr467-201ENSMUST00000084756 927 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.53□□□□□ -1.2
Syne4Q8CII8 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Syne4Q8CII8 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Syne4Q8CII8 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Syne4Q8CII8 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm25917-201ENSMUST00000104267 130 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm12931-201ENSMUST00000117046 324 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm24065-201ENSMUST00000157487 264 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm24719-201ENSMUST00000157520 110 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm15257-201ENSMUST00000177680 883 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm15252-201ENSMUST00000177750 883 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm15256-201ENSMUST00000177793 883 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm15260-201ENSMUST00000179402 883 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Syne4Q8CII8 Gm37380-201ENSMUST00000193752 397 ntBASIC7.52□□□□□ -1.21
Syne4Q8CII8 Ighv1-44-201ENSMUST00000195597 352 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms