Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm23979-201ENSMUST00000104071 128 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm11972-201ENSMUST00000118514 389 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 M6pr-ps-201ENSMUST00000120481 830 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm14300-201ENSMUST00000120800 946 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm19815-201ENSMUST00000175818 335 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm29160-201ENSMUST00000190094 699 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm7769-201ENSMUST00000212900 933 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm19095-201ENSMUST00000220533 730 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Brf1Q8CFK2 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm6558-201ENSMUST00000191934 1973 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Rnu11-201ENSMUST00000104135 134 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm15616-201ENSMUST00000118662 375 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm11796-201ENSMUST00000120208 972 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm5809-201ENSMUST00000121854 529 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm23426-201ENSMUST00000122483 318 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm6264-201ENSMUST00000160802 624 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm9529-201ENSMUST00000177598 579 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm9285-201ENSMUST00000177691 697 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.9□□□□□ -1.14
Brf1Q8CFK2 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms