Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm44823-201ENSMUST00000204775 1107 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm44604-201ENSMUST00000205475 496 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm19885-201ENSMUST00000212853 343 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm18242-201ENSMUST00000218455 542 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm9292-201ENSMUST00000222008 710 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm37902-201ENSMUST00000192839 1683 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Gm10826-201ENSMUST00000215366 3304 ntBASIC10.5□□□□□ -0.73
Pabpn1Q8CCS6 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 AL670757.1-201ENSMUST00000223668 1959 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm24855-201ENSMUST00000104848 97 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Mir3080-201ENSMUST00000175010 79 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm36997-201ENSMUST00000195090 707 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm4332-201ENSMUST00000196114 346 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm21461-201ENSMUST00000200382 863 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm17766-201ENSMUST00000209223 442 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm18597-201ENSMUST00000209519 694 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm6049-201ENSMUST00000222369 458 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 AC162934.3-201ENSMUST00000223015 841 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 AC113031.6-202ENSMUST00000228468 1145 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 AC122346.2-201ENSMUST00000224326 2931 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pabpn1Q8CCS6 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm11443-201ENSMUST00000118790 479 ntBASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm12303-201ENSMUST00000119506 673 ntBASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm24731-201ENSMUST00000158227 131 ntBASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm25717-201ENSMUST00000158631 353 ntBASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm5139-201ENSMUST00000175943 249 ntBASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm20691-201ENSMUST00000176889 333 ntBASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC10.48□□□□□ -0.73
Pabpn1Q8CCS6 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms