Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm9321-201ENSMUST00000221179 778 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 AC154431.2-201ENSMUST00000225215 1055 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 AC154757.2-201ENSMUST00000228885 743 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm44039-201ENSMUST00000204192 2246 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm37725-201ENSMUST00000193965 2125 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm38156-201ENSMUST00000194601 2260 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm11799-201ENSMUST00000116110 460 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Mir1953-201ENSMUST00000157866 89 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm4904-201ENSMUST00000178243 1195 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm21614-201ENSMUST00000183260 1005 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm27853-201ENSMUST00000184176 250 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 AC159267.1-201ENSMUST00000226702 678 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 AC135086.1-201ENSMUST00000228621 817 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm15732-201ENSMUST00000079794 480 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc60Q8C4J0 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 AC098728.1-202ENSMUST00000226656 2198 ntBASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc60Q8C4J0 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm16511-201ENSMUST00000120019 564 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm15181-201ENSMUST00000120142 177 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm15502-201ENSMUST00000121449 208 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm11882-201ENSMUST00000121463 506 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm44163-201ENSMUST00000205140 475 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Ccdc60Q8C4J0 AU020206-202ENSMUST00000206358 3009 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms