Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim41Q5NCC3 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim41Q5NCC3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm42678-201ENSMUST00000197163 2221 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Mup-ps16-201ENSMUST00000120085 596 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm12044-201ENSMUST00000120335 213 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm27373-201ENSMUST00000184017 184 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm18727-201ENSMUST00000185981 553 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm28802-201ENSMUST00000188624 944 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Ighv1-27-201ENSMUST00000194473 340 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm44982-201ENSMUST00000208795 471 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm8575-201ENSMUST00000210262 521 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm45900-201ENSMUST00000211879 409 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm8290-201ENSMUST00000218202 477 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm8137-201ENSMUST00000218997 463 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 CT010480.3-201ENSMUST00000224712 259 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 AC166574.7-201ENSMUST00000228502 704 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim41Q5NCC3 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm11797-201ENSMUST00000121336 754 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm12639-201ENSMUST00000121400 493 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm24002-201ENSMUST00000158456 104 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm18417-201ENSMUST00000176564 648 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm28353-201ENSMUST00000186482 570 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm28533-201ENSMUST00000186741 570 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm18407-201ENSMUST00000192126 790 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 AC159205.2-201ENSMUST00000223759 816 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 AC116656.1-201ENSMUST00000227040 755 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim41Q5NCC3 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Gm42700-201ENSMUST00000199071 2437 ntBASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim41Q5NCC3 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms