Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 CT009713.5-201ENSMUST00000224508 909 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 AC154738.2-201ENSMUST00000227403 1110 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 AC125523.1-201ENSMUST00000228018 934 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm37199-201ENSMUST00000193881 4065 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.21□□□□□ -1.41
Col8a1Q00780 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.21□□□□□ -1.41
Col8a1Q00780 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Col8a1Q00780 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 AC126251.1-201ENSMUST00000228170 2707 ntBASIC6.21□□□□□ -1.41
Col8a1Q00780 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Col8a1Q00780 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.21□□□□□ -1.41
Col8a1Q00780 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.21□□□□□ -1.41
Col8a1Q00780 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.21□□□□□ -1.41
Col8a1Q00780 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a1Q00780 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 CR974429.2-201ENSMUST00000221883 1696 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm26417-201ENSMUST00000104274 135 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm26429-201ENSMUST00000104829 110 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm9439-201ENSMUST00000119554 973 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm14898-201ENSMUST00000120202 645 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm13495-201ENSMUST00000121156 537 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Mup-ps22-201ENSMUST00000121611 243 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.21□□□□□ -1.42
Col8a1Q00780 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm24211-201ENSMUST00000158264 107 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm26169-201ENSMUST00000158420 135 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm23386-201ENSMUST00000158585 144 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Mir7020-201ENSMUST00000183787 70 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm28980-201ENSMUST00000187877 219 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm38213-201ENSMUST00000193203 173 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm7897-201ENSMUST00000193981 554 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm42767-201ENSMUST00000198583 632 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm4410-201ENSMUST00000199349 686 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm43487-201ENSMUST00000200331 1031 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm2040-201ENSMUST00000202979 289 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a1Q00780 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col8a1Q00780 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.21□□□□□ -1.42
Col8a1Q00780 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a1Q00780 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms