Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37809-201ENSMUST00000195050 931 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm7492-201ENSMUST00000201745 725 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm38840-201ENSMUST00000204716 843 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm44823-201ENSMUST00000204775 1107 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm45485-201ENSMUST00000211229 357 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm26442-201ENSMUST00000082588 153 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm44553-201ENSMUST00000206316 2037 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 AC156636.1-201ENSMUST00000218639 2229 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm43019-201ENSMUST00000196948 2863 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm24709-201ENSMUST00000104123 132 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm11902-201ENSMUST00000118849 270 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm14925-201ENSMUST00000120611 438 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm24435-201ENSMUST00000157886 110 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm20691-201ENSMUST00000176889 333 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm26557-201ENSMUST00000180756 493 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 AC166574.3-201ENSMUST00000226725 367 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.74□□□□□ -1.49
Nkx3-1P97436 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Nkx3-1P97436 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.73□□□□□ -1.49
Nkx3-1P97436 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nkx3-1P97436 Gm13137-201ENSMUST00000118035 345 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms