Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.09□□□□□ -1.27
NcanP55066 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NcanP55066 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.09□□□□□ -1.27
NcanP55066 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.09□□□□□ -1.27
NcanP55066 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.09□□□□□ -1.27
NcanP55066 Gm13811-201ENSMUST00000117800 256 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm14000-201ENSMUST00000118670 233 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm13887-201ENSMUST00000119009 344 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm13537-201ENSMUST00000120467 267 ntBASIC7.09□□□□□ -1.27
NcanP55066 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.09□□□□□ -1.27
NcanP55066 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC7.09□□□□□ -1.27
NcanP55066 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NcanP55066 Gm27219-201ENSMUST00000184633 742 ntBASIC7.09□□□□□ -1.27
NcanP55066 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Gm19206-201ENSMUST00000186401 827 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm28266-201ENSMUST00000191410 439 ntBASIC7.09□□□□□ -1.27
NcanP55066 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm44471-201ENSMUST00000197963 100 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC7.09□□□□□ -1.27
NcanP55066 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Gm17950-201ENSMUST00000214617 646 ntBASIC7.09□□□□□ -1.27
NcanP55066 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.09□□□□□ -1.27
NcanP55066 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.09□□□□□ -1.27
NcanP55066 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NcanP55066 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NcanP55066 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NcanP55066 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NcanP55066 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.09□□□□□ -1.27
NcanP55066 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NcanP55066 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.09□□□□□ -1.28
NcanP55066 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
NcanP55066 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NcanP55066 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.09□□□□□ -1.28
NcanP55066 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
NcanP55066 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.08□□□□□ -1.28
NcanP55066 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Gm5512-202ENSMUST00000220222 1522 ntBASIC7.08□□□□□ -1.28
NcanP55066 Rian-209ENSMUST00000182406 3476 ntBASIC7.08□□□□□ -1.28
NcanP55066 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.08□□□□□ -1.28
NcanP55066 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.08□□□□□ -1.28
NcanP55066 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Gm4997-201ENSMUST00000154056 360 ntBASIC7.08□□□□□ -1.28
NcanP55066 Mir1932-201ENSMUST00000157390 90 ntBASIC7.08□□□□□ -1.28
NcanP55066 Gm25374-201ENSMUST00000158158 101 ntBASIC7.08□□□□□ -1.28
NcanP55066 Gm23343-201ENSMUST00000158964 143 ntBASIC7.08□□□□□ -1.28
NcanP55066 Gm22690-201ENSMUST00000175054 110 ntBASIC7.08□□□□□ -1.28
NcanP55066 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.08□□□□□ -1.28
NcanP55066 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.08□□□□□ -1.28
NcanP55066 Gm35013-201ENSMUST00000197218 832 ntBASIC7.08□□□□□ -1.28
NcanP55066 Mir5121-201ENSMUST00000198528 74 ntBASIC7.08□□□□□ -1.28
NcanP55066 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Gm18914-201ENSMUST00000214625 616 ntBASIC7.08□□□□□ -1.28
NcanP55066 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
NcanP55066 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NcanP55066 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.08□□□□□ -1.28
NcanP55066 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.08□□□□□ -1.28
NcanP55066 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.08□□□□□ -1.28
NcanP55066 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NcanP55066 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.08□□□□□ -1.28
NcanP55066 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.08□□□□□ -1.28
NcanP55066 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NcanP55066 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.08□□□□□ -1.28
NcanP55066 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.08□□□□□ -1.28
NcanP55066 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms