Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm15616-201ENSMUST00000118662 375 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm7113-201ENSMUST00000120477 958 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm13578-201ENSMUST00000120849 590 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm22275-201ENSMUST00000122470 310 ntBASIC6.37□□□□□ -1.39
Sox3P53784 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Gm26410-201ENSMUST00000157670 261 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox3P53784 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Mir7220-201ENSMUST00000183978 60 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Mir7008-201ENSMUST00000184398 63 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm28952-201ENSMUST00000189285 681 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm28413-201ENSMUST00000189369 291 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm37809-201ENSMUST00000195050 931 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm42673-201ENSMUST00000202676 337 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm44566-201ENSMUST00000207638 304 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm45497-201ENSMUST00000211701 740 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.37□□□□□ -1.39
Sox3P53784 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm2840-201ENSMUST00000048361 411 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox3P53784 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Gm26130-201ENSMUST00000083171 138 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sox3P53784 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Sox3P53784 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm15203-201ENSMUST00000117668 455 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm12740-201ENSMUST00000118794 308 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm5793-201ENSMUST00000119393 630 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 Gm8215-201ENSMUST00000120627 990 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm12630-201ENSMUST00000121575 784 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm5809-201ENSMUST00000121854 529 ntBASIC6.36□□□□□ -1.39
Sox3P53784 BC064078-201ENSMUST00000122939 570 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.36□□□□□ -1.39
Sox3P53784 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm27460-201ENSMUST00000184213 100 ntBASIC6.36□□□□□ -1.39
Sox3P53784 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm37669-201ENSMUST00000192184 820 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm8190-201ENSMUST00000199603 586 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm9800-201ENSMUST00000052615 336 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm5612-201ENSMUST00000053326 375 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sox3P53784 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sox3P53784 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.36□□□□□ -1.39
Sox3P53784 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Sox3P53784 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sox3P53784 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.35□□□□□ -1.39
Sox3P53784 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox3P53784 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms