Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col18a1P39061 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm14115-201ENSMUST00000119242 482 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC8.68□□□□□ -1.02
Col18a1P39061 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm18356-201ENSMUST00000185677 623 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm20926-201ENSMUST00000194457 696 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm44061-201ENSMUST00000203962 1195 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm44559-201ENSMUST00000207177 1012 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm18597-201ENSMUST00000209519 694 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col18a1P39061 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm7680-201ENSMUST00000216198 1348 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col18a1P39061 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm18880-201ENSMUST00000223333 1541 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Lipe-203ENSMUST00000105177 1251 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm11877-201ENSMUST00000118921 852 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC8.67□□□□□ -1.02
Col18a1P39061 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm24741-201ENSMUST00000158857 106 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm21728-201ENSMUST00000188442 695 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm21889-201ENSMUST00000188487 695 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm20932-201ENSMUST00000189115 694 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm21920-201ENSMUST00000190042 695 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC8.67□□□□□ -1.02
Col18a1P39061 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm46192-201ENSMUST00000217894 326 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 AC164597.2-201ENSMUST00000226738 603 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col18a1P39061 Desi2-202ENSMUST00000069568 1193 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col18a1P39061 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Col18a1P39061 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm37221-201ENSMUST00000194472 3007 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Crebbp-205ENSMUST00000205765 7749 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Col18a1P39061 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.67□□□□□ -1.02
Col18a1P39061 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Col18a1P39061 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col18a1P39061 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm13579-201ENSMUST00000118519 517 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC8.66□□□□□ -1.02
Col18a1P39061 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm24731-201ENSMUST00000158227 131 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Gm24216-201ENSMUST00000158259 117 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Gm27970-201ENSMUST00000184854 407 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm18382-201ENSMUST00000194394 582 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms