Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col2a1P28481 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col2a1P28481 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Col2a1P28481 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Mir6337-201ENSMUST00000184194 105 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gm38122-201ENSMUST00000192679 885 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gm37784-201ENSMUST00000193233 189 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm30694-201ENSMUST00000209278 1230 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm25133-201ENSMUST00000082647 130 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gm25515-201ENSMUST00000083858 157 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm44178-201ENSMUST00000205229 2930 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.39□□□□□ -1.23
Col2a1P28481 AC107453.1-201ENSMUST00000227490 3268 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Col2a1P28481 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Col2a1P28481 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.39□□□□□ -1.23
Col2a1P28481 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col2a1P28481 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC7.39□□□□□ -1.23
Col2a1P28481 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Col2a1P28481 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm23739-201ENSMUST00000102295 108 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Gm12399-201ENSMUST00000121475 446 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm29519-201ENSMUST00000186994 398 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Gm3544-201ENSMUST00000196129 305 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col2a1P28481 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Col2a1P28481 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.38□□□□□ -1.23
Col2a1P28481 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Col2a1P28481 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Col2a1P28481 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 Gm4911-201ENSMUST00000119388 945 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 Gm7189-201ENSMUST00000119811 429 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Col2a1P28481 Gm37463-201ENSMUST00000193819 796 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 Gm45196-201ENSMUST00000206751 825 ntBASIC7.37□□□□□ -1.23
Col2a1P28481 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms