Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.29□□□□□ -1.4
Clk1P22518 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Clk1P22518 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Clk1P22518 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm2199-201ENSMUST00000119065 874 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Gm11263-201ENSMUST00000121853 749 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Gm23756-201ENSMUST00000157582 114 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Gm22702-201ENSMUST00000175372 69 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Gm27014-201ENSMUST00000182658 937 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Mir8114-201ENSMUST00000183582 111 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Mir8120-201ENSMUST00000185035 139 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Gm28413-201ENSMUST00000189369 291 ntBASIC6.29□□□□□ -1.4
Clk1P22518 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.29□□□□□ -1.4
Clk1P22518 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clk1P22518 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clk1P22518 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clk1P22518 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clk1P22518 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.29□□□□□ -1.4
Clk1P22518 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.29□□□□□ -1.4
Clk1P22518 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clk1P22518 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Clk1P22518 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Clk1P22518 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.28□□□□□ -1.4
Clk1P22518 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clk1P22518 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Clk1P22518 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clk1P22518 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC6.28□□□□□ -1.4
Clk1P22518 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.28□□□□□ -1.4
Clk1P22518 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clk1P22518 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm11858-201ENSMUST00000117935 838 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Gm16418-201ENSMUST00000118577 171 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Gm11581-201ENSMUST00000122024 763 ntBASIC6.28□□□□□ -1.4
Clk1P22518 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm26183-201ENSMUST00000157685 139 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
Clk1P22518 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm36935-201ENSMUST00000192526 292 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clk1P22518 Gm37375-201ENSMUST00000193859 387 ntBASIC6.28□□□□□ -1.4
Clk1P22518 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.28□□□□□ -1.4
Clk1P22518 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms