Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC5.23□□□□□ -1.57
Sdc1P18828 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Arhgef33-207ENSMUST00000224966 490 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 AC107663.2-201ENSMUST00000225534 1234 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sdc1P18828 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sdc1P18828 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.23□□□□□ -1.57
Sdc1P18828 AC122769.1-201ENSMUST00000226930 1714 ntBASIC5.23□□□□□ -1.57
Sdc1P18828 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Sdc1P18828 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Sdc1P18828 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm12242-201ENSMUST00000118824 738 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm13130-201ENSMUST00000119195 1166 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm22820-201ENSMUST00000157205 329 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm17973-201ENSMUST00000174509 520 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm26436-201ENSMUST00000180325 132 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm17970-201ENSMUST00000192199 685 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm37260-201ENSMUST00000193748 1251 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm37017-201ENSMUST00000195266 747 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm2996-201ENSMUST00000211398 537 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 AC163041.1-201ENSMUST00000221984 133 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sdc1P18828 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sdc1P18828 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm37535-201ENSMUST00000194442 2365 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Sdc1P18828 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.22□□□□□ -1.57
Sdc1P18828 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sdc1P18828 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Sdc1P18828 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sdc1P18828 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sdc1P18828 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.21□□□□□ -1.57
Sdc1P18828 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Sdc1P18828 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Sdc1P18828 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.21□□□□□ -1.58
Sdc1P18828 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sdc1P18828 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm14466-201ENSMUST00000119028 451 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm12879-201ENSMUST00000120003 1182 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm6620-201ENSMUST00000120113 715 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm14053-201ENSMUST00000121662 470 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm4887-201ENSMUST00000122230 1053 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Gm1947-201ENSMUST00000122451 910 ntBASIC5.21□□□□□ -1.58
Sdc1P18828 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sdc1P18828 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms