Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm4585-201ENSMUST00000207218 452 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm45478-201ENSMUST00000209472 211 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm8275-201ENSMUST00000219732 424 ntBASIC6.54□□□□□ -1.36
Lire1P11260 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.54□□□□□ -1.36
Lire1P11260 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.54□□□□□ -1.36
Lire1P11260 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lire1P11260 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lire1P11260 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.54□□□□□ -1.36
Lire1P11260 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
Lire1P11260 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Lire1P11260 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm7821-201ENSMUST00000117111 788 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm12903-201ENSMUST00000121015 544 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.53□□□□□ -1.36
Lire1P11260 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm24155-201ENSMUST00000175259 110 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Gm27684-201ENSMUST00000183778 80 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm28975-201ENSMUST00000186412 686 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm7341-201ENSMUST00000192183 926 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm38030-201ENSMUST00000192376 475 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.53□□□□□ -1.36
Lire1P11260 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Gm8182-201ENSMUST00000197863 769 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm43974-201ENSMUST00000205080 684 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.53□□□□□ -1.36
Lire1P11260 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.53□□□□□ -1.36
Lire1P11260 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Lire1P11260 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.53□□□□□ -1.36
Lire1P11260 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.53□□□□□ -1.36
Lire1P11260 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Lire1P11260 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Lire1P11260 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Lire1P11260 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms