Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Clp1Q99LI9 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Clp1Q99LI9 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm25093-201ENSMUST00000103993 132 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm12985-201ENSMUST00000118376 183 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm12504-202ENSMUST00000148026 306 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm23205-201ENSMUST00000158671 103 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm5611-201ENSMUST00000164523 852 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm20702-201ENSMUST00000176181 460 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm27360-201ENSMUST00000183487 80 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm37191-201ENSMUST00000193346 388 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm44971-201ENSMUST00000206192 337 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm45689-201ENSMUST00000210522 133 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 AC156504.1-201ENSMUST00000214608 157 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 AC121844.1-201ENSMUST00000218706 137 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.86□□□□□ -1.15
Clp1Q99LI9 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Clp1Q99LI9 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Clp1Q99LI9 AC122357.2-201ENSMUST00000220732 1525 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm23942-201ENSMUST00000101956 107 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm22781-201ENSMUST00000104083 137 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm25311-201ENSMUST00000104136 132 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Gm12225-201ENSMUST00000117995 298 ntBASIC7.85□□□□□ -1.15
Clp1Q99LI9 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms