Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mir6348-201ENSMUST00000183804 120 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm5711-201ENSMUST00000197896 421 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm42804-201ENSMUST00000199701 178 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm43108-201ENSMUST00000200525 293 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm44380-201ENSMUST00000203125 293 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm45725-201ENSMUST00000212962 337 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm17849-201ENSMUST00000219788 853 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm18601-201ENSMUST00000220831 634 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm15149-201ENSMUST00000119370 360 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm14900-201ENSMUST00000120304 733 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm42782-201ENSMUST00000197286 522 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm45070-201ENSMUST00000208100 246 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm45279-201ENSMUST00000210315 391 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm11360-201ENSMUST00000221898 262 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm21731-201ENSMUST00000079524 489 ntBASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm1Q8VC85 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm24173-201ENSMUST00000104130 128 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm12468-201ENSMUST00000116189 404 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm14904-201ENSMUST00000117067 335 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm14513-201ENSMUST00000117403 123 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm13141-201ENSMUST00000117417 456 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm12135-201ENSMUST00000119170 466 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm13877-201ENSMUST00000120614 417 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm14300-201ENSMUST00000120800 946 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm11545-201ENSMUST00000146507 375 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.3□□□□□ -1.4
Lsm1Q8VC85 Gm4997-201ENSMUST00000154056 360 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms