Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.56□□□□□ -1.2
Syne4Q8CII8 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.56□□□□□ -1.2
Syne4Q8CII8 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Syne4Q8CII8 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.56□□□□□ -1.2
Syne4Q8CII8 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Dgkh-204ENSMUST00000227767 3319 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm26067-201ENSMUST00000103789 110 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm13006-201ENSMUST00000118683 214 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm13430-201ENSMUST00000121366 288 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm22730-201ENSMUST00000158085 171 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm23343-201ENSMUST00000158964 143 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm7891-201ENSMUST00000190284 843 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm44265-201ENSMUST00000203631 465 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 CT009600.1-201ENSMUST00000228771 337 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.55□□□□□ -1.2
Syne4Q8CII8 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC7.55□□□□□ -1.2
Syne4Q8CII8 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm26289-201ENSMUST00000104169 131 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm13114-201ENSMUST00000117605 106 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm23030-201ENSMUST00000158004 273 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm23071-201ENSMUST00000158242 115 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm24733-201ENSMUST00000158863 253 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm7952-201ENSMUST00000180540 984 ntBASIC7.54□□□□□ -1.2
Syne4Q8CII8 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.54□□□□□ -1.2
Syne4Q8CII8 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms