Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.94□□□□□ -1.14
Brf1Q8CFK2 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm37423-201ENSMUST00000194246 3342 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm24173-201ENSMUST00000104130 128 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm12630-201ENSMUST00000121575 784 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm24382-201ENSMUST00000122698 107 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm25435-201ENSMUST00000158277 267 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Mir6367-201ENSMUST00000183385 102 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm37380-201ENSMUST00000193752 397 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm7019-201ENSMUST00000194122 369 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm29784-201ENSMUST00000196217 406 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm8607-201ENSMUST00000221864 431 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm5341-201ENSMUST00000058881 489 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brf1Q8CFK2 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.93□□□□□ -1.14
Brf1Q8CFK2 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Mir1907-201ENSMUST00000122509 90 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm22604-201ENSMUST00000157604 311 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm25550-201ENSMUST00000158079 128 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm8506-201ENSMUST00000186661 829 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm37439-201ENSMUST00000193150 856 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm20926-201ENSMUST00000194457 696 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm18586-201ENSMUST00000217265 518 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 Gm5928-201ENSMUST00000221839 466 ntBASIC7.92□□□□□ -1.14
Brf1Q8CFK2 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms