Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm12713-201ENSMUST00000118404 764 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm13207-201ENSMUST00000119862 773 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm13462-201ENSMUST00000121472 961 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm15928-201ENSMUST00000122455 280 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Mir1929-201ENSMUST00000158635 93 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 AW822073-201ENSMUST00000075305 555 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm23734-201ENSMUST00000083753 109 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc28bQ8CEG5 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Mir704-201ENSMUST00000102106 77 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm26417-201ENSMUST00000104274 135 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm26416-201ENSMUST00000104280 134 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm12229-201ENSMUST00000120487 468 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm11295-201ENSMUST00000121379 803 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm11545-201ENSMUST00000146507 375 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm26025-201ENSMUST00000158655 271 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm17121-201ENSMUST00000170414 847 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm17222-201ENSMUST00000180135 847 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm29369-201ENSMUST00000190674 615 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm38135-201ENSMUST00000195068 502 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm3103-201ENSMUST00000198073 752 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm42965-201ENSMUST00000201254 250 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm18484-201ENSMUST00000204389 991 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm45454-201ENSMUST00000211484 455 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 AC159205.1-201ENSMUST00000225513 1099 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ccdc28bQ8CEG5 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ccdc28bQ8CEG5 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms