Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm44361-201ENSMUST00000197960 94 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm8930-201ENSMUST00000201693 768 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm44795-201ENSMUST00000205496 319 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm26163-201ENSMUST00000083792 178 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 CT009757.6-201ENSMUST00000220661 2312 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a6Q8C6K9 Dgkh-204ENSMUST00000227767 3319 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm36401-201ENSMUST00000194255 2028 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm6446-201ENSMUST00000120604 818 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm27972-201ENSMUST00000184720 137 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm46364-201ENSMUST00000218548 319 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm16536-201ENSMUST00000162209 1589 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm25917-201ENSMUST00000104267 130 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm13428-201ENSMUST00000117540 365 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm13641-201ENSMUST00000117993 473 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm23408-201ENSMUST00000158523 265 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm18849-201ENSMUST00000189861 560 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm5886-202ENSMUST00000203957 522 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm38840-201ENSMUST00000204716 843 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm44705-201ENSMUST00000206719 339 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm8058-201ENSMUST00000217247 587 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm9088-201ENSMUST00000220237 508 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm4012-201ENSMUST00000221504 581 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Gm42692-201ENSMUST00000199482 2833 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col6a6Q8C6K9 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm44178-201ENSMUST00000205229 2930 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm12768-201ENSMUST00000120055 759 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm18290-201ENSMUST00000202900 844 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 Gm44251-201ENSMUST00000204963 442 ntBASIC5.9□□□□□ -1.46
Col6a6Q8C6K9 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms