Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm24695-201ENSMUST00000083877 83 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Cmah-208ENSMUST00000224819 9482 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc60Q8C4J0 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Mir678-201ENSMUST00000102114 84 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm22284-201ENSMUST00000104132 132 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm23884-201ENSMUST00000122687 294 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm14747-201ENSMUST00000149888 984 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm8454-201ENSMUST00000196980 811 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm45514-201ENSMUST00000211531 689 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc60Q8C4J0 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm13176-201ENSMUST00000117910 477 ntBASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm11472-201ENSMUST00000121305 556 ntBASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm37376-201ENSMUST00000192176 453 ntBASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm45196-201ENSMUST00000206751 825 ntBASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm46364-201ENSMUST00000218548 319 ntBASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc60Q8C4J0 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm42544-201ENSMUST00000197868 3242 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm12939-201ENSMUST00000117303 165 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm12937-201ENSMUST00000118333 448 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm15164-201ENSMUST00000122203 271 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 n-R5s109-201ENSMUST00000179195 119 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm23945-201ENSMUST00000179609 92 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm5050-201ENSMUST00000197164 775 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm23011-202ENSMUST00000197855 275 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm43243-201ENSMUST00000199964 278 ntBASIC8.23□□□□□ -1.09
Ccdc60Q8C4J0 Gm7554-201ENSMUST00000202282 574 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms