Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trub1Q8C0D0 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm12937-201ENSMUST00000118333 448 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm5601-201ENSMUST00000118909 972 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm11976-201ENSMUST00000119236 295 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm12175-201ENSMUST00000122081 345 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm23426-201ENSMUST00000122483 318 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm7613-201ENSMUST00000139070 487 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm19480-201ENSMUST00000185547 667 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm2229-201ENSMUST00000193328 710 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm20128-201ENSMUST00000196189 417 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm29784-201ENSMUST00000196217 406 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm7452-201ENSMUST00000200764 788 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm44252-201ENSMUST00000204187 330 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.69□□□□□ -1.34
Trub1Q8C0D0 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trub1Q8C0D0 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm22710-201ENSMUST00000116892 125 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm7746-201ENSMUST00000120966 503 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm22915-201ENSMUST00000157615 136 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm25675-201ENSMUST00000174979 118 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm9285-201ENSMUST00000177691 697 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm18559-201ENSMUST00000208249 604 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm6436-201ENSMUST00000077163 451 ntBASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.68□□□□□ -1.34
Trub1Q8C0D0 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms