Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm23031-201ENSMUST00000157998 119 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm29234-201ENSMUST00000187452 1262 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm3841-201ENSMUST00000191399 451 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm37901-201ENSMUST00000195107 514 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 AC154424.1-201ENSMUST00000225883 799 ntBASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp40Q8BWR4 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm42685-201ENSMUST00000200378 2390 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm43421-201ENSMUST00000200044 2905 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm10764-202ENSMUST00000220397 2335 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm14513-201ENSMUST00000117403 123 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm13137-201ENSMUST00000118035 345 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm14054-201ENSMUST00000120744 704 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm13578-201ENSMUST00000120849 590 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm25374-201ENSMUST00000158158 101 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm28527-201ENSMUST00000185210 297 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm9517-201ENSMUST00000195021 874 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm17997-201ENSMUST00000211801 840 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 AC126685.1-201ENSMUST00000221001 121 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 AC154634.2-201ENSMUST00000225983 1184 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 AC140288.1-201ENSMUST00000226329 503 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 AC139197.1-201ENSMUST00000228332 813 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 n-R5s58-201ENSMUST00000093682 119 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Usp40Q8BWR4 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm14580-201ENSMUST00000119122 718 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm15967-201ENSMUST00000120027 1116 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm26037-201ENSMUST00000158150 311 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm8582-201ENSMUST00000164061 789 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm19840-201ENSMUST00000169624 882 ntBASIC9.08□□□□□ -0.96
Usp40Q8BWR4 Gm26381-201ENSMUST00000174895 92 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms